BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D07LP1|AL426513
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig412 1451 0.0
>3x_Contig412
Length = 2162
Score = 1451 bits (732), Expect = 0.0
Identities = 787/804 (97%), Gaps = 1/804 (0%)
Strand = Plus / Plus
Query: 1 gtttgtagccacaaatcataaaaactggaatattcatataacggtatttctatcactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 gtttgtagccacaaatcataaaaactggaatattcatataacggtatttctatcactttt 1195
Query: 61 cttaacgttcgaatgtgatgttgcggtgtcttgcatcgcagttttatttcgttaagatac 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 cttaacgttcgaatgtaatgttgcggtgtcttgcatcgcagttttatttcgttaagatac 1255
Query: 121 atgtgccaaaattcagcaccgaagaaatgcaatccaatgtaggattccgcaaaggcatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 atgtgccaaaattcagcaccgaagaaatgcaatccaatgtaggattccgcaaaggcatat 1315
Query: 181 ttttggaaaagttgcttatcactgggcataattttattgcagatcttcaagtattctacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 ttttggaaaagttgcttatcactgggcataattttattgcagatcttcaagtattctacc 1375
Query: 241 catattaacaatgacctattgttgaaatactgaagagcattctcgaatatagcgtgaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 catattaacaatgacctattgttgaaatactgaagagcattctcgaatatagcgtgaaac 1435
Query: 301 ttaccaaaattccctagtttatactccaatagtccgtattcgacatgataattctccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 ttaccaaaattccctagtttatactccaatagtccgtattcgacatgataattctccaaa 1495
Query: 361 aaggggaactggtagagtaatgattcatatgtcgatcgtactagctgaagaaggtcttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1496 aaggggaactggtagagtaatgattcatatgtcgatcgtactagctgaagaaggtcttta 1555
Query: 421 ttaatagattttgagataggtgatgccttcagcaataaatgattcaaaagattctcccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1556 ttaatagattttgagataggtgatgccttcagcaataaatgattcaaaagattctcccaa 1615
Query: 481 tggtgcaaactttttggatatttgcatattaagagactgaattcagatagcttttgatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1616 tggtgcaaactttttggatatttgcatattaagagactgaattcagatagcttttgatca 1675
Query: 541 cctaatagattaagatcatcttccatttcctttttcacagtactggcagagcaacgatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1676 cctaatagattaagatcatcttccatttcctttttcacagtactggcagagcaacgatga 1735
Query: 601 tttcagtgcgtttagctgcgtgctctactttgttatg-ttggctcatgagttaaactacg 659
||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||
Sbjct: 1736 tttcagtgcgtttagctgcgtgctctactttctcatgcttggctcatgagttaaactacg 1795
Query: 660 tgtatatatttcatgttcttgataatggtcatttttctattttgcatctataaacaaaga 719
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1796 tgtatatcccccccgttcttgataatggtcatttttctattttgcatctataaacaaaga 1855
Query: 720 aataattgaacagacctacaactgacatggcaaagagatctttgttcggaactcattcca 779
||||||||| |||||||||||||||||||||||||| | ||| || ||| ||||||||||
Sbjct: 1856 aataattgaccagacctacaactgacatggcaaagacaccttcgtccggcactcattcca 1915
Query: 780 attcattgcttcatcgcagtatat 803
||||| ||||||||||||||||||
Sbjct: 1916 attcactgcttcatcgcagtatat 1939
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7233
Number of Sequences: 1807
Number of extensions: 7233
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)